Package: blimps-examples Description-md5: 18ddc9ff8aab78bc1efd53cccc24389d Description-en: blocks database improved searcher (example data) BLIMPS (BLocks IMProved Searcher) is a searching tool that scores a protein sequence against blocks or a block against sequences. . This package contains example data. Package: blimps-utils Description-md5: 1afe4567b883b39e7050a4f604a91e17 Description-en: blocks database improved searcher BLIMPS (BLocks IMProved Searcher) is a searching tool that scores a protein sequence against blocks or a block against sequences. . This package contains the binaries. Package: dynare-matlab Description-md5: 90e8fcabb135fcf60e09f0be51774946 Description-en: MATLAB support for Dynare Dynare is a software platform for handling a wide class of economic models, in particular dynamic stochastic general equilibrium (DSGE) and overlapping generations (OLG) models. The models solved by Dynare include those relying on the rational expectations hypothesis, wherein agents form their expectations about the future in a way consistent with the model. But Dynare is also able to handle models where expectations are formed differently: on one extreme, models where agents perfectly anticipate the future; on the other extreme, models where agents have limited rationality or imperfect knowledge of the state of the economy and, hence, form their expectations through a learning process. In terms of types of agents, models solved by Dynare can incorporate consumers, productive firms, governments, monetary authorities, investors and financial intermediaries. Some degree of heterogeneity can be achieved by including several distinct classes of agents in each of the aforementioned agent categories. . Dynare offers a user-friendly and intuitive way of describing these models. It is able to perform simulations of the model given a calibration of the model parameters and is also able to estimate these parameters given a dataset. In practice, the user will write a text file containing the list of model variables, the dynamic equations linking these variables together, the computing tasks to be performed and the desired graphical or numerical outputs. . This package is only useful to users having MATLAB installed on their machine. It contains the source of the MEX files and will recompile them using the existing MATLAB installation. Package: firmware-qcom-dragonboard845c Description-md5: 3507088ed94312d44b4d5f5207d7374f Description-en: Binary firmware for various Qualcomm drivers used on Dragonboard 845c This package contains the binary firmware for GPU, USB, Venus, DSP hardware coprocessors found on SDM845, which is the main SoC on the Dragonboard 845c. Package: firmware-qcom-rb3gen2 Description-md5: 932dde057b2dbbe5130433652321aa51 Description-en: Binary firmware for Qualcomm Robotics RB3 Gen2 This package contains the binary firmware for the QCS6490, which is the main SoC on the Robotics RB3 Gen2. Package: firmware-qcom-rb5 Description-md5: 0abf8cbedf59bff7af0b4696550319c7 Description-en: Binary firmware for various Qualcomm drivers used on Robotics RB5 This package contains the binary firmware for the SM8250, which is the main SoC on the Robotics RB5. Package: gitaly-installer Description-md5: a0db51942a7c98ec821bffaf2b5a8789 Description-en: Git RPC service for handling all the git calls made by GitLab Gitaly makes the git data storage tier of large GitLab instances fast. This is achieved by moving git operations as close to the data as possible and Optimizing git services using caching. Gitaly is a core service of gitlab. This package installs Gitaly from pre-built binaries from Gitlab artifacts. Package: gitlab-common Description-md5: ccb3bd8dfffd14a6e75d53315368861a Description-en: git powered software platform to collaborate on code (common) gitlab provides web based interface to host source code and track issues. It allows anyone for fork a repository and send merge requests. Code review is possible using merge request workflow. Using groups and roles project access can be controlled. . This package includes configurations common to gitlab and gitaly. Package: iso2mesh-demos Description-md5: 90b91382c05547d48c75972da0d46964 Description-en: sample files and demo scripts for Iso2Mesh toolbox This package contains sample meshing script and data files for testing and showcasing Iso2Mesh functions. The main functions demonstrated in this package include surface-based mesh generation via s2m/surf2mesh, volume-based mesh generation via v2m/vol2mesh, mesh smoothing (sms), boolean operations (surfboolean), downsampling (meshsample) and remeshing (remeshsurf). Package: iso2mesh-tools Description-md5: 3b89ffbe6b8b0aee8bbafebce5518870 Description-en: 3D mesh generation and repairing utilities This package contains 3D mesh generation and repairing tools that can be used independently and invoked inside iso2mesh. . These tools include cgalmesh (3D mesh generation from volumetric images), `cgalpoly` (3D mesh generation from polyhedral surfaces), `cgalsimp2` (triangular surface simplification), `meshfix` (3D surface cleaning and repairing), and `jmeshlib` (3D surface cleaning). Package: libblimps3 Description-md5: a1ad50ab461eca726e0a4e957f1a2ffa Description-en: blocks database improved searcher library BLIMPS (BLocks IMProved Searcher) is a searching tool that scores a protein sequence against blocks or a block against sequences. . This package provides the shared library. Package: libblimps3-dev Description-md5: 4d04b155f279229d68533b0ec59a8e4f Description-en: blocks database improved searcher library (development) BLIMPS (BLocks IMProved Searcher) is a searching tool that scores a protein sequence against blocks or a block against sequences. . This package provides the library development headers and the static library. Package: libggml0-backend-cuda Description-md5: 56db844880e610d6c8401c92a13f05dd Description-en: Tensor library for machine learning - CUDA backend ggml is a tensor library for machine learning with the following features: . * Low-level cross-platform implementation * Integer quantization support * Broad hardware support * Automatic differentiation * ADAM and L-BFGS optimizers * No third-party dependencies * Zero memory allocations during runtime . On Debian, ggml is shipped as a package that depends on one of the CPU or GPU backends. . This package provides the CUDA backend, for NVIDIA GPUs. Package: libgloo-cuda-0 Description-md5: 11fe5b4bb9197845522ecac87176ae15 Description-en: Collective communications library (shared object) Gloo is a collective communications library. It comes with a number of collective algorithms useful for machine learning applications. These include a barrier, broadcast, and allreduce. . Transport of data between participating machines is abstracted so that IP can be used at all times, or InifiniBand (or RoCE) when available. In the latter case, if the InfiniBand transport is used, GPUDirect can be used to accelerate cross machine GPU-to-GPU memory transfers. . Where applicable, algorithms have an implementation that works with system memory buffers, and one that works with NVIDIA GPU memory buffers. In the latter case, it is not necessary to copy memory between host and device; this is taken care of by the algorithm implementations. . This package ships the shared object for Gloo. Package: libgloo-cuda-dev Description-md5: 1eb5d67397fdb9a8162c5c082d1e6d78 Description-en: Collective communications library (development files) Gloo is a collective communications library. It comes with a number of collective algorithms useful for machine learning applications. These include a barrier, broadcast, and allreduce. . Transport of data between participating machines is abstracted so that IP can be used at all times, or InifiniBand (or RoCE) when available. In the latter case, if the InfiniBand transport is used, GPUDirect can be used to accelerate cross machine GPU-to-GPU memory transfers. . Where applicable, algorithms have an implementation that works with system memory buffers, and one that works with NVIDIA GPU memory buffers. In the latter case, it is not necessary to copy memory between host and device; this is taken care of by the algorithm implementations. . This package ships the development files. Package: libparmetis-dev Description-md5: 839c770f477cb92f6af09275d807c484 Description-en: Parallel Graph Partitioning and Sparse Matrix Ordering Libs: Devel ParMetis computes minimal-cut partitions of graphs and meshes in parallel, and orders variables for minimal fill when using direct solvers for sparse matrices. It does all this in parallel, and also can efficiently re-partition a graph or mesh whose connectivity has changed. . This package contains files needed to develop programs using ParMetis. Package: libparmetis4.0 Description-md5: 17a6686f47a3b63f4328881bffab697b Description-en: Parallel Graph Partitioning and Sparse Matrix Ordering Shared Libs ParMetis computes minimal-cut partitions of graphs and meshes in parallel, and orders variables for minimal fill when using direct solvers for sparse matrices. It does all this in parallel, and also can efficiently re-partition a graph or mesh whose connectivity has changed. . This package contains the ParMetis shared libraries. Package: libtensorpipe-cuda-0 Description-md5: b49a93726d4da68e6161824dc04f12b3 Description-en: tensor-aware point-to-point communication primitive for machine learning The TensorPipe project provides a tensor-aware channel to transfer rich objects from one process to another while using the fastest transport for the tensors contained therein (e.g., CUDA device-to-device copy). . This package contains shared objects. Package: libtensorpipe-cuda-dev Description-md5: 6b4397dd30e29fe70ebb4ea9c71ececf Description-en: tensor-aware point-to-point communication primitive for machine learning The TensorPipe project provides a tensor-aware channel to transfer rich objects from one process to another while using the fastest transport for the tensors contained therein (e.g., CUDA device-to-device copy). . This package contains development files. Package: matlab-iso2mesh Description-md5: 70c13d5376ac1a8d098638a8deed9e4e Description-en: 3D surface and volumetric mesh generator for MATLAB Iso2Mesh is a MATLAB/Octave-based mesh generation toolbox, designed for easy creation of high quality surface and tetrahedral meshes from 3D volumetric images. It contains a rich set of mesh processing scripts/programs, working either independently or interacting with external free meshing utilities. Iso2Mesh toolbox can directly convert a 3D image stack, including binary, segmented or gray-scale images such as MRI or CT scans, into quality volumetric meshes. This makes it particularly suitable for multi-modality medical imaging data analysis and multi-physics modeling. Iso2Mesh is cross-platform and is compatible with both MATLAB and GNU Octave. . This package contains the MATLAB support for iso2mesh. Package: octave-astra-toolbox Description-md5: 19af48502a78cfefea101547a3f3aa12 Description-en: toolbox of high-performance GPU primitives for 2D and 3D tomography (octave) It supports 2D parallel and fan beam geometries, and 3D parallel and cone beam. All of them have highly flexible source/detector positioning. . A large number of 2D and 3D algorithms are available, including FBP, SIRT, SART, CGLS. . The basic forward and backward projection operations are GPU-accelerated, and directly callable from Octave and Python to enable building new algorithms. . This is the Octave library. Package: octave-iso2mesh Description-md5: ce676342413ec36338c3beea8b44f3e9 Description-en: 3D surface and volumetric mesh generator for Octave Iso2Mesh is a MATLAB/Octave-based mesh generation toolbox, designed for easy creation of high quality surface and tetrahedral meshes from 3D volumetric images. It contains a rich set of mesh processing scripts/programs, working either independently or interacting with external free meshing utilities. Iso2Mesh toolbox can directly convert a 3D image stack, including binary, segmented or gray-scale images such as MRI or CT scans, into quality volumetric meshes. This makes it particularly suitable for multi-modality medical imaging data analysis and multi-physics modeling. Iso2Mesh is cross-platform and is compatible with both MATLAB and GNU Octave. . This package contains the Octave support for iso2mesh. Package: parmetis-doc Description-md5: 55cc39b179c0b5b2dedead6fc6a8c34f Description-en: Parallel Graph Partitioning and Sparse Matrix Ordering Lib - Docs ParMetis computes minimal-cut partitions of graphs and meshes in parallel, and orders variables for minimal fill when using direct solvers for sparse matrices. It does all this in parallel, and also can efficiently re-partition a graph or mesh whose connectivity has changed. . This package contains the documentation and example files. Package: parmetis-test Description-md5: b9b53f52a3b7e53d03b5260911e600a9 Description-en: Parallel Graph Partitioning and Sparse Matrix Ordering Tests ParMetis computes minimal-cut partitions of graphs and meshes in parallel, and orders variables for minimal fill when using direct solvers for sparse matrices. It does all this in parallel, and also can efficiently re-partition a graph or mesh whose connectivity has changed. . This package contains programs which test the ParMetis libraries using files in the parmetis-doc package's examples directory. Package: python3-astra-toolbox Description-md5: 7f59c83f6c23c2f985b14da805dfece4 Description-en: toolbox of high-performance GPU primitives for 2D and 3D tomography (Python3) It supports 2D parallel and fan beam geometries, and 3D parallel and cone beam. All of them have highly flexible source/detector positioning. . A large number of 2D and 3D algorithms are available, including FBP, SIRT, SART, CGLS. . The basic forward and backward projection operations are GPU-accelerated, and directly callable from Octave and Python to enable building new algorithms. . This is the Python3 library. Package: sift Description-md5: 7788bf12148938f8dc8e4675657ce605 Description-en: predicts if a substitution in a protein has a phenotypic effect SIFT is a sequence homology-based tool that sorts intolerant from tolerant amino acid substitutions and predicts whether an amino acid substitution in a protein will have a phenotypic effect. SIFT is based on the premise that protein evolution is correlated with protein function. Positions important for function should be conserved in an alignment of the protein family, whereas unimportant positions should appear diverse in an alignment. Package: libodpic5 Description-md5: ab5d684e6cf00e24207e0ddef1bfe15f Description-en: Oracle Database Programming Interface - runtime C shared library Oracle Database Programming Interface for C (ODPI-C) is an open source library of C code that simplifies access to Oracle Database for applications written in C or C++. It is a wrapper over Oracle Call Interface (OCI) that makes applications and language interfaces easier to develop. . ODPI-C supports basic and advanced features of Oracle Database and Oracle Client. See the homepage for a list. . This package contains the C shared library needed to run programs that dynamically link to ODPI-C. Package: odpic-dev Description-md5: 49a15361421aff7972b2ab791fe2768e Description-en: Oracle Database Programming Interface - development files Oracle Database Programming Interface for C (ODPI-C) is an open source library of C code that simplifies access to Oracle Database for applications written in C or C++. It is a wrapper over Oracle Call Interface (OCI) that makes applications and language interfaces easier to develop. . ODPI-C supports basic and advanced features of Oracle Database and Oracle Client. See the homepage for a list. . This package contains the files needed to develop programs that use ODPI-C; including the headers, examples, and sample programs.